SPM/Python

SPM and Python

Nipype

Nipype (Neuroimaging in Python) has an SPM interface.

Tutorials can be found at:

• https://miykael.github.io/nipype_tutorial/
• https://pythonhosted.org/nipype/users/examples/fmri_spm_auditory.html

Calling MATLAB from Python

• https://www.mathworks.com/products/matlab/matlab-and-python.html
• https://www.mathworks.com/help/matlab/matlab-engine-for-python.html

You can also call MATLAB in a subprocess:

• https://docs.python.org/3/library/subprocess.html#module-subprocess

using the -batch (execute MATLAB script non-interactively) and -sd (set initial working directory) input argument options:

• https://www.mathworks.com/help/matlab/ref/matlablinux.html#buknt99-1-option1optionN

spm1d

spm1d is a package for one-dimensional Statistical Parametric Mapping.