SPM/Batch

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See this Powerpoint presentation for an overview.

Batch Script for SPM8[edit]

See the relevant chapter in the SPM manual.

Any batch script should follow the template:

spm('defaults','fmri');
spm_jobman('initcfg');

matlabbatch{1}.spm... = ...;

spm_jobman('run',matlabbatch);

The Batch Scripts for SPM5 below can also be used in SPM8.

For general comments on SPM8 scripting see the SPM scripting page.

Batch Script in SPM5[edit]

Examples of script (for SPM5 and compatible with SPM8) are provided with the SPM Data Sets, for example:

See also:

Batch Script for SPM2[edit]

There is an example batch script written by Rik Henson, for a single subject fMRI data set (preprocessing and statistics).